SubtiBank SubtiBank
ydiF [2018-02-13T13:46:11.000Z]
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ydiF [2018-02-13T13:46:11.000Z]

similar to ABC transporter (ATP-binding protein)
Locus
BSU05950
Isoelectric point
4.87
Molecular weight
73.27 kDa
Protein length
642 aa Sequence Blast
Gene length
1926 bp Sequence Blast
Function
unknown
Product
ABC transporter (ATP-binding protein)
Essential
no
Synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
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Categories containing this gene/protein

  • Cellular processes → Transporters → ABC transporters → Unknown ABC transporters

    • Gene

    Coordinates
    644,528 → 646,456

    The protein

    Protein family

  • EF3 subfamily (according to Swiss-Prot)

    • Paralogous protein(s)

  • YfmR, YfmM, YkpA

    • Structure

  • 3J5S (EttA from E. coli, 34% identity) PubMed
  • 4FIN (EttA from E. coli, 34% identity) PubMed

    • Expression and Regulation

    Operons

    Genes
    ydiF
    Description
    PubMed
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    Biological materials

    Mutant

  • MGNA-C199 (ydiF::erm), available at the NBRP B. subtilis, Japan
  • BKE05950 (ΔydiF::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATATTATTTCACCTCTGCT, downstream forward: _UP4_TAAAAAAGTCAAGCACCTCT
  • BKK05950 (ΔydiF::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATATTATTTCACCTCTGCT, downstream forward: _UP4_TAAAAAAGTCAAGCACCTCT

    • References

    Reviews

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    Original publications

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